Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910735.1_cds_XP_016460764.1_54154
CDS Infomation

[gene=LOC107784197] [db_xref=GeneID:107784197] [protein=protein argonaute 4-like] [protein_id=XP_016460764.1] [location=join(63238..63465,63564..63769,63851..64084,64185..64321,64403..64500,64576..64673,64809..64977,65061..65177,65255..65362,65451..65513,65698..65811,65889..66054,66139..66251,66342..66479,66557..66687,67085..67150,67541..67604,67703..67814,67883..67956,68346..68440,68580..68611,68774..68949)] [gbkey=CDS]
Sequence

ATGGCTGAAGAAGACAATAGTGGAGTAACAGACGCTCTGCCCCCTCCTCCCCCTATTCCG
CCTGATTTCTCTCCAGCAAAAGCGGAACCAGAGCCGGTGAAGAAAAAGGTTTTACGTGTT
CCCATGGCTAGGCGTGGCCTTGGAAGCAAGGGACAAAAGATTCCGATCCTTACCAATCAC
TTTAAAGTGAACGTGTCTAATGTTGACGGACACTTCTTTCATTACAGTGTCGCCCTATTT
TATGAGGATGGTCGACCTGTCGAGGGAAAAGGAATTGGCAGAAAAGTTCTTGATAGAGTG
CATGAAACATATGATACAGAATTGGCTGGGAAGGATTTTGCATACGATGGGGAGAAAAGC
TTGTTCACCATTGGTTCACTACCTAGAAATAAATTAGAGTTCACAGTTGTCCTAGAGGAC
GTTATATCTAATCGGAACAATGGGAACAATGGCAACTCTAGCCCTGGAAGACATGGAAGT
CCAAATGAAAATGATAGGAAAAGATTAAGGCGGCCGTACCAATCAAAATCTTATAAGGTG
GAGATTAGCTTTGCTGCCAAGATTCCGATGCAGGCAATTGCGAATGCTTTGCGAGGTCAA
GAGTCTGAGAACTCTCAAGAAGCATTGAGAGTTTTGGATATAATTTTAAGGCAACATGCG
GCCAAACAGGGTTGTCTGCTTGTTCGACAGTCCTTTTTCCATAATGACCCAAAGAATTTT
GCGGAAGTTGGAGGTGGTGTTCTTGGATGTCGAGGGTTCCATTCAAGTTTTCGAACCACT
CAGTCTGGATTGTCTTTGAACATTGATGTGTCTACCACGATGATAATCCAGCCTGGACCT
GTTGTTGACTTTTTGATTGCAAACCAAAATGCAAAAGATCCCTTTTCACTTGATTGGGCG
AAGGCAAAACGTACTTTGAAGAATCTGAGGGTGAAGACTGCTCCCGCTAACCAAGAGTAC
AAAATAACTGGATTGAGTGAAAAATCTTGTCGTGAGCAGACGTTTACTCTAAAGCAGAGG
AGCAAAGATGAGGATGGTGAAGTGCAAACATCGGAAGTGACAGTTTATGATTACTTTGTT
AATCATCGTAACATAGACTTGCGATATTCCGCTGATTTACCGTGCATCAATGTTGGAAAG
CCCAAGCGCCCCACCTATTTCCCTGTTGAGCTCTGCTCGTTGGTCTCATTGCAAAGGTAC
ACAAAAGCCTTGTCCACCTTTCAGAGGTCCTCCTTGGTGGAGAAGTCTAGGCAAAAGCCT
CAAGAGAGAATGCAAATTTTGAGCAATGCTCTAAAAATCAACAATTATGATGCTGAGCCT
CTGCTTCGTGCTAGCGGCGTCTCAATCAGTAGCAACTTCACCCAGGTCGAAGGGCGTGTT
CTGCCTGCCCCTAAGTTAAAGGCAGGAAATGGAGATGACCTTTTCTCACGAAATGGCAGG
TGGAATTTTAATAATAAGAGATTCTTTGATCCAGCAAAGGTAGAGCGTTGGGCTGTTGTC
AACTTTTCTGCACGCTGTGACATACGTGGCCTAGTCAGAGATTTGACAAGAATTGGAGAG
ATGAAAGGAATTAGTGTGGAAGCTCCATTTGAAGTGTTTGAAGAGTCTCCACAGCTTAGA
AGGGCTCCACCTCTTGTCAGAGTTGAAAAGATGTTTGAAGAGATCCAGTCAAAACTTCCC
GGTGCCCCGAAATTTCTTCTTTGTCTTCTTCCTGAGAGGAAAAATTGTGACATATATGGA
CCATGGAAGAGGAAAAATCTGGCTGATTATGGTATAGTAACCCAATGCCTGGCTCCTGGA
AGAGTCAACGATCAGTACCTGACAAACCTTCTCCTTAAGATCAACGCAAAGCTTGGTGGT
TTAAATTCTGTGTTAGCTGTTGAGGATTCGCCATCCATTCCCATGGTATCGAAGGTTCCC
ACAATGATTCTTGGAATGGACGTATCACATGGCTCTCCCGGCCAGTCTGATGTTCCGTCA
ATTGCTGCAGTTGTAAGTTCAAGGCAGTGGCCTTCAATATCTCGTTATAGAGCTTCTGTG
CGCACTCAATCTCCTAAAGTAGAGATGATTGATAACTTATTTAAGAAAGTTTCAGACACT
GAGGACGATGGGATTATGAGGGAACTTTTGCTAGATTTTTATGTGAGTTCCGGGAAAAGG
AAGCCTGAGCATATAATAATATTCAGGGATGGTGTCAGTGAATCACAATTTAATCAAGTT
CTAAACATTGAGCTGGACCAGCTCATTGAGGCCTGCAAGTTTCTTGATGAAAAGTGGTCT
CCCAAATTTGTGATCATTGTTGCTCAGAAAAATCATCATACAAAGTTTTTCCAGGCTGGA
TCTCCTGATAATGTTCCTCCAGGTACAATTATAGACAACAAAGTTTGTCATCCAAGGAAC
TATGACTTCTACCTGTGTGCCCATGCGGGCATGATTGGTACCACTCGACCTACACATTAC
CATGTGTTGTTGGATGAAGTTGGTTTTTCACCTGATGATCTTCAAGACCTTGTTCATAAT
CTGTCCTATGTATATCAAAGAAGCACTACTGCTATATCCATTGTGGCTCCAGTAAGTTAT
GCCCATTTGGCCGCCACACAAGTTGGACAATGGATGAAATTTGAGGACGCGTCAGAGACA
TCATCAAGCCATGGTGGTCTGACAAATGCCGGTCCAGTTACTGTTCCTCAGTTGCCCCGA
CTTCAGGAGACCGTTTCTAGCTCCATGTTCTTCTGTTGA

Peptide Sequence

PEP ID

XP_016460764.1
PEP Infomation

PREDICTED: protein argonaute 4-like [Nicotiana tabacum]
Sequence

MAEEDNSGVTDALPPPPPIPPDFSPAKAEPEPVKKKVLRVPMARRGLGSKGQKIPILTNH
FKVNVSNVDGHFFHYSVALFYEDGRPVEGKGIGRKVLDRVHETYDTELAGKDFAYDGEKS
LFTIGSLPRNKLEFTVVLEDVISNRNNGNNGNSSPGRHGSPNENDRKRLRRPYQSKSYKV
EISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNF
AEVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNAKDPFSLDWA
KAKRTLKNLRVKTAPANQEYKITGLSEKSCREQTFTLKQRSKDEDGEVQTSEVTVYDYFV
NHRNIDLRYSADLPCINVGKPKRPTYFPVELCSLVSLQRYTKALSTFQRSSLVEKSRQKP
QERMQILSNALKINNYDAEPLLRASGVSISSNFTQVEGRVLPAPKLKAGNGDDLFSRNGR
WNFNNKRFFDPAKVERWAVVNFSARCDIRGLVRDLTRIGEMKGISVEAPFEVFEESPQLR
RAPPLVRVEKMFEEIQSKLPGAPKFLLCLLPERKNCDIYGPWKRKNLADYGIVTQCLAPG
RVNDQYLTNLLLKINAKLGGLNSVLAVEDSPSIPMVSKVPTMILGMDVSHGSPGQSDVPS
IAAVVSSRQWPSISRYRASVRTQSPKVEMIDNLFKKVSDTEDDGIMRELLLDFYVSSGKR
KPEHIIIFRDGVSESQFNQVLNIELDQLIEACKFLDEKWSPKFVIIVAQKNHHTKFFQAG
SPDNVPPGTIIDNKVCHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEVGFSPDDLQDLVHN
LSYVYQRSTTAISIVAPVSYAHLAATQVGQWMKFEDASETSSSHGGLTNAGPVTVPQLPR
LQETVSSSMFFC

Transcript Sequence

Gene sequence data has not been registered.